Linux 下载 JGI 的 IMG_VR

CAAS_IFR_zp2024-03-17 10:02

进入IMG_VR

点击左上角DOWNLOAD，登录自己的账号，点击使用XML

进入之后，主要看url，你的下载地址

bash 复制代码

url="/portal/ext-api/downloads/get_tape_file?blocking=true&url=/IMG_VR/download/_JAMO/63a22c8a3b5d0133c73fb0a8/README-high_confidence.txt"

进入linux命令行，登录账号

bash 复制代码

curl 'https://signon.jgi.doe.gov/signon/create' --data-urlencode 'login=*****' --data-urlencode 'password=*****' -c cookies > /dev/null
# ****处修改为账号与密码

根据URL编号下载IMG_VR_2022-12-19_7

bash 复制代码

curl -C - -b cookies -o README-high_confidence.txt 'https://genome.jgi.doe.gov/portal/ext-api/downloads/get_tape_file?blocking=true&url=/IMG_VR/download/_JAMO/63a22c8a3b5d0133c73fb0a8/README-high_confidence.txt'
curl -C - -b cookies -o IMGVR_all_proteins-high_confidence.faa.gz 'https://genome.jgi.doe.gov/portal/ext-api/downloads/get_tape_file?blocking=true&url=/IMG_VR/download/_JAMO/63a22c8a3b5d0133c73fb0a2/IMGVR_all_proteins-high_confidence.faa.gz'
curl -C - -b cookies -o IMGVR_all_nucleotides-high_confidence.fna.gz 'https://genome.jgi.doe.gov/portal/ext-api/downloads/get_tape_file?blocking=true&url=/IMG_VR/download/_JAMO/63a22c8a3b5d0133c73fb0a0/IMGVR_all_nucleotides-high_confidence.fna.gz'
curl -C - -b cookies -o IMGVR_all_Sequence_information-high_confidence.tsv 'https://genome.jgi.doe.gov/portal/ext-api/downloads/get_tape_file?blocking=true&url=/IMG_VR/download/_JAMO/63a22c8a3b5d0133c73fb0a4/IMGVR_all_Sequence_information-high_confidence.tsv'
curl -C - -b cookies -o IMGVR_all_Host_information-high_confidence.tsv 'https://genome.jgi.doe.gov/portal/ext-api/downloads/get_tape_file?blocking=true&url=/IMG_VR/download/_JAMO/63a22c8a3b5d0133c73fb0a6/IMGVR_all_Host_information-high_confidence.tsv'