数据分析 | 调用Optuna库实现基于TPE的贝叶斯优化 | 以随机森林回归为例

1. Optuna库的优势

对比bayes_opt和hyperoptOptuna不仅可以衔接到PyTorch等深度学习框架上,还可以与sklearn-optimize结合使用,这也是我最喜欢的地方,Optuna因此特性可以被使用于各种各样的优化场景。

2. 导入必要的库及加载数据

用的是sklearn自带的房价数据,只是我把它保存下来了。

python 复制代码
import optuna
import pandas as pd
import numpy as np
from sklearn.model_selection import KFold,cross_validate
print(optuna.__version__)
from sklearn.ensemble import RandomForestRegressor as RFR
data = pd.read_csv(r'D:\2暂存文件\Sth with Py\贝叶斯优化\data.csv')
X = data.iloc[:,0:8]
y = data.iloc[:,8]

3. 定义目标函数与参数空间

Optuna相对于其他库,不需要单独输入参数或参数空间,只需要直接在目标函数中定义参数空间即可。这里以负均方误差为损失函数。

python 复制代码
def optuna_objective(trial) :
    # 定义参数空间
    n_estimators = trial.suggest_int('n_estimators',10,100,1)
    max_depth = trial.suggest_int('max_depth',10,50,1)
    max_features = trial.suggest_int('max_features',10,30,1)
    min_impurtity_decrease = trial.suggest_float('min_impurity_decrease',0.0, 5.0, step=0.1)

    # 定义评估器
    reg = RFR(n_estimators=n_estimators,
              max_depth=max_depth,
              max_features=max_features,
              min_impurity_decrease=min_impurtity_decrease,
              random_state=1412,
              verbose=False,
              n_jobs=-1)

    # 定义交叉过程,输出负均方误差
    cv = KFold(n_splits=5,shuffle=True,random_state=1412)
    validation_loss = cross_validate(reg,X,y,
                                     scoring='neg_mean_squared_error',
                                     cv=cv,
                                     verbose=True,
                                     n_jobs=-1,
                                     error_score='raise')
    return np.mean(validation_loss['test_score'])

4. 定义优化目标函数

在Optuna中我们可以调用sampler模块进行选用想要的优化算法,比如TPE、GP等等。

python 复制代码
def optimizer_optuna(n_trials,algo):

    # 定义使用TPE或GP
    if algo == 'TPE':
        algo = optuna.samplers.TPESampler(n_startup_trials=20,n_ei_candidates=30)
    elif algo == 'GP':
        from optuna.integration import SkoptSampler
        import skopt
        algo = SkoptSampler(skopt_kwargs={'base_estimator':'GP',
                                          'n_initial_points':10,
                                          'acq_func':'EI'})
    study = optuna.create_study(sampler=algo,direction='maximize')
    study.optimize(optuna_objective,n_trials=n_trials,show_progress_bar=True)

    print('best_params:',study.best_trial.params,
              'best_score:',study.best_trial.values,
              '\n')

    return study.best_trial.params, study.best_trial.values

5. 执行部分

python 复制代码
import warnings
warnings.filterwarnings('ignore',message='The objective has been evaluated at this point before trails')
optuna.logging.set_verbosity(optuna.logging.ERROR)
best_params, best_score = optimizer_optuna(200,'TPE')

6. 完整代码

python 复制代码
import optuna
import pandas as pd
import numpy as np
from sklearn.model_selection import KFold,cross_validate
print(optuna.__version__)
from sklearn.ensemble import RandomForestRegressor as RFR

data = pd.read_csv(r'D:\2暂存文件\Sth with Py\贝叶斯优化\data.csv')
X = data.iloc[:,0:8]
y = data.iloc[:,8]

def optuna_objective(trial) :
    # 定义参数空间
    n_estimators = trial.suggest_int('n_estimators',10,100,1)
    max_depth = trial.suggest_int('max_depth',10,50,1)
    max_features = trial.suggest_int('max_features',10,30,1)
    min_impurtity_decrease = trial.suggest_float('min_impurity_decrease',0.0, 5.0, step=0.1)

    # 定义评估器
    reg = RFR(n_estimators=n_estimators,
              max_depth=max_depth,
              max_features=max_features,
              min_impurity_decrease=min_impurtity_decrease,
              random_state=1412,
              verbose=False,
              n_jobs=-1)

    # 定义交叉过程,输出负均方误差
    cv = KFold(n_splits=5,shuffle=True,random_state=1412)
    validation_loss = cross_validate(reg,X,y,
                                     scoring='neg_mean_squared_error',
                                     cv=cv,
                                     verbose=True,
                                     n_jobs=-1,
                                     error_score='raise')
    return np.mean(validation_loss['test_score'])

def optimizer_optuna(n_trials,algo):

    # 定义使用TPE或GP
    if algo == 'TPE':
        algo = optuna.samplers.TPESampler(n_startup_trials=20,n_ei_candidates=30)
    elif algo == 'GP':
        from optuna.integration import SkoptSampler
        import skopt
        algo = SkoptSampler(skopt_kwargs={'base_estimator':'GP',
                                          'n_initial_points':10,
                                          'acq_func':'EI'})
    study = optuna.create_study(sampler=algo,direction='maximize')
    study.optimize(optuna_objective,n_trials=n_trials,show_progress_bar=True)

    print('best_params:',study.best_trial.params,
              'best_score:',study.best_trial.values,
              '\n')

    return study.best_trial.params, study.best_trial.values

import warnings
warnings.filterwarnings('ignore',message='The objective has been evaluated at this point before trails')
optuna.logging.set_verbosity(optuna.logging.ERROR)
best_params, best_score = optimizer_optuna(200,'TPE')
相关推荐
xiaoyalian4 小时前
R语言绘图过程中遇到图例的图块中出现字符“a“的解决方法
笔记·r语言·数据可视化
weixin_466202784 小时前
第31周:天气识别(Tensorflow实战第三周)
分类·数据挖掘·tensorflow
湫ccc5 小时前
《Python基础》之字符串格式化输出
开发语言·python
Red Red5 小时前
网安基础知识|IDS入侵检测系统|IPS入侵防御系统|堡垒机|VPN|EDR|CC防御|云安全-VDC/VPC|安全服务
网络·笔记·学习·安全·web安全
mqiqe6 小时前
Python MySQL通过Binlog 获取变更记录 恢复数据
开发语言·python·mysql
AttackingLin6 小时前
2024强网杯--babyheap house of apple2解法
linux·开发语言·python
贰十六6 小时前
笔记:Centos Nginx Jdk Mysql OpenOffce KkFile Minio安装部署
笔记·nginx·centos
知兀6 小时前
Java的方法、基本和引用数据类型
java·笔记·黑马程序员
哭泣的眼泪4086 小时前
解析粗糙度仪在工业制造及材料科学和建筑工程领域的重要性
python·算法·django·virtualenv·pygame
湫ccc7 小时前
《Python基础》之基本数据类型
开发语言·python